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April 2015 Lab Meeting

Agenda

10:00 Eastern

  • Greg Wilson (Software Carpentry Foundation)
  • Tiffany Timbers (Simon Fraser University, Burnaby, BC, Canada)
  • Luiz Irber (Michigan State University, East Lansing, MI, USA)
  • Jonah Duckles (University of Oklahoma, Norman, OK, USA)
  • Timothée Poisot (université de Montréal)
  • Raniere Silva
  • Noam Ross (UC Davis)
  • Amy Brown (unaffiliated, Toronto)
  • Karin Lagesen (University of Oslo)
  • Anelda van der Walt (Talarify)
  • Emily Davenport (Cornell University)
  • John Blischak (University of Chicago)
  • Ashwin Srinath (Clemson University)
  • Arliss Collins (Mozilla Science Lab)
  • Frank Willmore (Independent research professional)
  • Victor Kwangchun Lee (xwMOOC, Korea)
  • Piotr Banaszkiewicz (AGH-UST, Kraków, Poland)
  • Olav Vahtras (KTH Sweden)
  • François Michonneau (University of Florida)
  • Klemens Noga (ACC Cyfronet AGH, Kraków, Poland)
  • Kate Hertweck (U Texas Tyler)
  • Denis Haine (U of Montreal)
  • Neal Davis (U of Illinois)
  • Sarah Stevens (U of Wisconsin - Madison)
  • Daniel Turek (UC Berkeley)
  • Logan Cox (University of Oklahoma, Norman, OK, USA)
  • Camille Avestruz (Yale University)
  • Abigail Cabunoc Mayes (Mozilla Science Lab)
  • Mark Wilber (University of California, Santa Barbara)
  • Isabelle Laforest-L. (Université du Québec a Montréal)
  • Aleksandra Pawlik (SSI, University of Manchester)
  • Laurent Gatto (University of Cambridge, UK)
  • Sue McClatchy (The Jackson Laboratory)
  • Kai Blin (DTU, Copenhagen, Denmark)
  • Ethan White (University of Florida / Utah State University)
  • Chris Kotfila (University at Albany, SUNY)
  • Jason Williams (Cold Spring Harbor Laboratory)
  • Jeramia Ory (King's College, PA)
  • Pauline Barmby (Northern Harvard University, London Canada)
  • Peter van Heusden (SANBI, University of the Western Cape, South Africa)
  • Caroline Li
  • Matthew Aiello-Lammens (UConn)
  • Easton White (UC- Davis)
  • Billy Rowell (HHMI Janelia Farm Campus) (listening only)
  • Leigh Sheneman (MSU)
  • Adina Howe (ISU)
  • Giacomo Peru (SSI, Edinburgh)
  • Katy Huff (ucberkeley)

19:00 Eastern

  • Greg Wilson (Software Carpentry Foundation)
  • Matt Davis
  • Damien Irving (University of Melbourne)
  • Nichole Bennett (University of Texas at Austin)
  • Joshua Ainsley (Fino Consulting)
  • Lauren Michael (University of Wisconsin-Madison)
  • Sheldon McKay
  • Lynne Williams (Child and Family Research Imaging Facility)
  • Gabriel Devenyi (Douglas Institute)
  • Tom Kelly (University of Otago, Dunedin, NZ)
  • Christina Koch (University of Wisconsin, Madison)
  • Gayathri Swaminathan
  • Dominic Barraclough
  • Zhuo Fu (UVA)
  • Hamid Mokhtarzadeh (U of MN)
  • Julia Gustavsen (University of British Columbia)
  • Fan Yang (Iowa State University)
  • Chris Friedline (Virginia Commonwealth University)
  • Ivan Gonzalez
  • Bill Mills (Mozilla Science Lab)
  • Noam Ross (UC Davis, @noamross)
  • Daniel Chen (Virginia Tech)
  • Steve Haddock (MBARI, practicalcomputing.org)
  • Adam Thomas (National Institutes of Health)
  • Bernhard Konrad (UBC)
  • François Michonneau (University of Florida)
  • John Corless (Dallas, TX)

Notes:

  • Jason: SCF is starting to bring in workshop fees ($8200 for January?)
    • uncollected fees ~2x collected fees right now
    • working on long-term followup & articulation of expectations
  • Karin/Matt: Following up on the discussion about workshops for commercial companies the steering committee has decided to run a pilot program
    • For profit companies charged $5000 for 1st workshop, $3000 for subsequent
      • i.e., 4X what we charge non-profit orgs
    • Instructors will work like normal (not be paid, travel covered)
    • A portion of extra fees will be used to run workshops for institutions that can't afford fees
    • After pilot will seek additional feedback
  • Karin: Notes from Steering Committee meetings are now openly available in the repo
  • Greg: LinkedIn group for instructors
    • https://www.linkedin.com/grp/home?gid=8279689
    • Looking for a volunteer to help manage this, please get in touch
    • Leigh Sheneman volunteers to help
    • Lynne Williams volunteers to help <williams.lynne99@gmail.com>
    • (Aleksandra: Leigh, let us know if you'd like support from one more person; basically, feel free to send a note on Discuss)
  • Managing the flood of email
    • One solution is change the way that we manage the groups. All instructors are in one group that have read/write access to all the lessons. We are going to split this into small groups (one for lesson) so that people don't get all email notification by default.
      • Gabriel Devenyi volunteers for GitHub group testing
  • Need a new sys admin volunteer
    • Peter van Heusden <pvh@sanbi.ac.za>
    • Gabriel Devenyi <gdevenyi@gmail.com>
  • Noam Ross is working on a few improvements for the R lesson like: where learners can get help after the workshop, how they can solve their own problem, ... Started a repo, https://github.com/noamross/zero-dependency-problems, where he is gathering examples from various fora and workshops of the types of things that typical students run into. Interested in contributions from people -- directly from student questions -- also for feedback on lessons, in terms of what material has already been covered, minimal reproducible examples. A question is how much this should be independent material versus being exercises/materials incorporated into Novice Lessons. Short term hope: people contribute example of questions/problems. Where do beginners hit a wall? How beginners should ask the questions? Everything is R: would be nice to have Python, Shell, SQL, ... as well. Some of the material might end up being good examples/exercises.
    • Greg: SWC and Data Carpentry exists also to have these non-technical questions answered.
  • Christina Koch revive the idea of extra material for our lessons. This is a experimental. This week we had a email thread about the need to drop some things from our lessons and move it to extra or something similar.
  • We want to have our novice lessons stable at the end of April to have a DOI.
    • On NEON http://neondataskills.org
    • DOI is for a particular version of a repository. You decide when you need a new DOI -- when there are enough changes to need one. People have been asking for a DOI so they can cite lessons.
    • If anyone has time to help clean up lessons in advance of getting the DOI, that would be great!
    • Tom: In R lesson we have one section called supplementary material.
    • Greg: You can add material into R lesson but people believe that they need to cover what are in the lesson so maybe keep it in another location is better.
      • using smaller chunks for lessons: 10 min instead of 15-20 sections? could try with select repo
  • Titus's ideas: http://ivory.idyll.org/blog/2015-some-workshop-or-unconference-ideas.html
  • Pauline: Q: What works for convincing orgs that its' worthwhile to bring groups in from the outside?
    • Aleksandra: One option is to offer to train up internal instructors. First couple of workshops can help with this training and fill the gap in the meantime.
    • Offloading administrative work -- university wants host to do all administration to "save" the cost of the SWC administration fee.
    • Path to affiliate status (better where its easier to have a budget item rather than ad-hoc)
    • Several thousand hours are invested in our lessons (but this only sways a few people)
    • Workshops are always over-subscribed
    • Satisfies the 'training' obligation you agreed to on your grant last year
  • Lesson sprint for summer:
    • Potential co-organizers (invite leaders and participants, ...)
      • Neal Davis
      • Tiffany Timbers (maybe)
      • Sheldon McKay
  • How to consult the Software Carpentry community about changes/ideas
    • Mail the discuss list for medium-large changes
    • Move detailed discussion to GH issue/repo
    • Small, lesson-specific questions in GH repo